MetaGxPancreas
This is the released version of MetaGxPancreas; for the devel version, see MetaGxPancreas.
Transcriptomic Pancreatic Cancer Datasets
Bioconductor version: Release (3.23)
A collection of pancreatic Cancer transcriptomic datasets that are part of the MetaGxData package compendium. This package contains multiple pancreas cancer datasets that have been downloaded from various resources and turned into SummarizedExperiment objects. The details of how the authors normalized the data can be found in the experiment data section of the objects. Additionally, the location the data was obtained from can be found in the url variables of the experiment data portion of each SE.
Author: Michael Zon [aut], Vandana Sandhu [aut], Christopher Eeles [ctb], Michael Tran Cao-Anh [ctb], Benjamin Haibe-Kains [aut, cre]
Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at utoronto.ca>
citation("MetaGxPancreas")):Michael Zon, Vandana Sandhu, Benjamin Haibe-Kains. MetaGxPancreas: Transcriptomic Pancreatic Cancer Datasets. doi:10.18129/B9.bioc.MetaGxPancreas, R package version 1.32.0, https://bioconductor.org/packages/MetaGxPancreas.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MetaGxPancreas")For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| No vignettes available | |
| Reference Manual |
Details
| biocViews | ArrayExpress, CancerData, ExperimentData, ExperimentHub, ExpressionData, GEO, Homo_sapiens_Data, MicroarrayData, NCI, SequencingData |
| Version | 1.32.0 |
| In Bioconductor since | BioC 3.7 (R-3.5) (8.5 years) |
| License | Artistic-2.0 |
| Depends | SummarizedExperiment, ExperimentHub, R (>= 3.6.0) |
| Imports | stats, impute, S4Vectors, AnnotationHub |
| System Requirements | |
| URL |
See More
| Suggests | testthat, knitr, BiocStyle, rmarkdown, markdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report, r-universe |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MetaGxPancreas_1.32.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/MetaGxPancreas |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MetaGxPancreas |
| Package Short Url | https://bioconductor.org/packages/MetaGxPancreas/ |
| Package Downloads Report | Download Stats |