MSstatsQCgui

This is the released version of MSstatsQCgui; for the devel version, see MSstatsQCgui.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7

A graphical user interface for MSstatsQC package

Bioconductor version: Release (3.23)

MSstatsQCgui is a Shiny app which provides longitudinal system suitability monitoring and quality control tools for proteomic experiments.

Author: Eralp Dogu [aut, cre], Sara Taheri [aut], Olga Vitek [aut]

Maintainer: Eralp Dogu <eralp.dogu at gmail.com>

Citation (from within R, enter citation("MSstatsQCgui")):

Eralp Dogu, Sara Taheri, Olga Vitek. MSstatsQCgui: A graphical user interface for MSstatsQC package. doi:10.18129/B9.bioc.MSstatsQCgui, R package version 1.32.0, https://bioconductor.org/packages/MSstatsQCgui.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSstatsQCgui")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsQCgui")

MSstatsQCgui	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GUI, MassSpectrometry, Proteomics, QualityControl, Software
Version	1.32.0
In Bioconductor since	BioC 3.7 (R-3.5) (8.5 years)
License	Artistic License 2.0
Depends
Imports	shiny, MSstatsQC, ggExtra, gridExtra, plotly, dplyr, grid
System Requirements
URL	http://msstats.org/msstatsqc
Bug Reports	https://groups.google.com/forum/#!forum/msstatsqc

Suggests	knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MSstatsQCgui_1.32.0.tar.gz
Windows Binary (x86_64)	MSstatsQCgui_1.32.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	MSstatsQCgui_1.32.0.tgz
macOS Binary (sonoma-arm64)	MSstatsQCgui_1.32.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MSstatsQCgui
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MSstatsQCgui
Package Short Url	https://bioconductor.org/packages/MSstatsQCgui/
Package Downloads Report	Download Stats