LRcellTypeMarkers
This is the released version of LRcellTypeMarkers; for the devel version, see LRcellTypeMarkers.
All Bioconductor versions of LRcellTypeMarkers
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13
Marker gene information for LRcell R Bioconductor package
Bioconductor version: 3.23 · Package version: 1.20.0
This is an external ExperimentData package for LRcell. This data package contains the gene enrichment scores calculated from scRNA-seq dataset which indicates the gene enrichment of each cell type in certain brain region. LRcell package is used to identify specific sub-cell types that drives the changes observed in a bulk RNA-seq differential gene expression experiment. For more details, please visit: https://github.com/marvinquiet/LRcell.
Maintainer: Wenjing Ma <wenjing.ma at emory.edu>
Citation
From within R, enter citation("LRcellTypeMarkers"):
Wenjing Ma. LRcellTypeMarkers: Marker gene information for LRcell R Bioconductor package. doi:10.18129/B9.bioc.LRcellTypeMarkers, R package version 1.20.0, https://bioconductor.org/packages/LRcellTypeMarkers.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("LRcellTypeMarkers")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.20.0 |
| License | MIT + file LICENSE |
| Bug Reports | https://github.com/marvinquiet/LRcellTypeMarkers/issues |
| Last updated | 2026-05-05 |
| In Bioconductor since | BioC 3.13 (R-4.1) (5 years) |
| Downloads rank | 354 of 434 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentData, ExperimentHub, ExpressionData, PackageTypeData, RNASeqData, SingleCellData |
| Package Short Url | https://bioconductor.org/packages/LRcellTypeMarkers/ |
Documentation
| Reference Manual |
Download
Follow the installation instructions to use this package in your R session.
| Source package | LRcellTypeMarkers_1.20.0.tar.gz |
| Source Repository | git clone https://git.bioconductor.org/packages/LRcellTypeMarkers |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/LRcellTypeMarkers |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 4.1)
Imports: ExperimentHub
Suggests: LRcell, BiocStyle, knitr, rmarkdown, roxygen2, testthat
Reverse dependencies
Suggests Me (1): LRcell