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GSE159526

This is the released version of GSE159526; for the devel version, see GSE159526.

All Bioconductor versions of GSE159526

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14

Placental cell DNA methylation data from GEO accession GSE159526

Bioconductor version: 3.23 · Package version: 1.18.0

19 term and 9 first trimester placental chorionic villi and matched cell-sorted samples ran on Illumina HumanMethylationEPIC DNA methylation microarrays. This data was made available on GEO accession [GSE159526](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE159526). Both the raw and processed data has been made available on \code{ExperimentHub}. Raw unprocessed data formatted as an RGChannelSet object for integration and normalization using minfi and other existing Bioconductor packages. Processed normalized data is also available as a DNA methylation \code{matrix}, with a corresponding phenotype information as a \code{data.frame} object.

Author: Victor Yuan [aut, cre] ORCID iD ORCID: 0000-0002-3394-998X

Maintainer: Victor Yuan <victor.2wy at gmail.com>

DOI: 10.18129/B9.bioc.GSE159526

Citation

From within R, enter citation("GSE159526"):

Victor Yuan. GSE159526: Placental cell DNA methylation data from GEO accession GSE159526. doi:10.18129/B9.bioc.GSE159526, R package version 1.18.0, https://bioconductor.org/packages/GSE159526.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GSE159526")

For older versions of R, please refer to the appropriate Bioconductor release.

Details

Version1.18.0
LicenseMIT + file LICENSE
URLhttps://github.com/wvictor14/GSE159526
Bug Reportshttps://github.com/wvictor14/GSE159526/issues
Last updated2026-05-05
In Bioconductor sinceBioC 3.14 (R-4.1) (4 years)
Downloads rank371 of 434
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsExperimentData, ExperimentHub, GEO, Genome, Homo_sapiens_Data, MethylationArrayData, Tissue
Package Short Url https://bioconductor.org/packages/GSE159526/

Documentation

Reference ManualPDF

Download

Follow the installation instructions to use this package in your R session.

Source packageGSE159526_1.18.0.tar.gz
Source Repositorygit clone https://git.bioconductor.org/packages/GSE159526
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/GSE159526
Package Downloads ReportDownload Stats
Dependencies

Suggests: ExperimentHub, BiocStyle, RefManageR, knitr, rmarkdown, testthat, minfi, tibble, sessioninfo