GSE103322
GEO accession data GSE103322 as a SingleCellExperiment
Bioconductor version: 3.23 · Package version: 1.18.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Single cell RNA-Seq data for 5902 cells from 18 patients with oral cavity head and neck squamous cell carcinoma available as GEO accession [GSE103322] (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE103322). GSE103322 data have been parsed into a SincleCellExperiment object available in ExperimentHub.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GSE103322")Details
| Maintainer | Mariano Alvarez <reef103@gmail.com> |
| Author | Mariano Alvarez [aut, cre] |
| License | Artistic-2.0 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | CancerData, DNASeqData, ExperimentData, ExperimentHub, ExpressionData, GEO, Genome, Homo_sapiens_Data, RNASeqData, SingleCellData |
| Package Short Url | https://bioconductor.org/packages/GSE103322/ |
Citation
From within R, enter citation("GSE103322"):
Mariano Alvarez. GSE103322: GEO accession data GSE103322 as a SingleCellExperiment. doi:10.18129/B9.bioc.GSE103322, R package version 1.18.0, https://bioconductor.org/packages/GSE103322.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | GSE103322_1.18.0.tar.gz |
Dependencies
Suggests: ExperimentHub (>= 0.99.6), knitr, BiocStyle, rmarkdown, SummarizedExperiment, SingleCellExperiment