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Dune

This is the released version of Dune; for the devel version, see Dune.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11

Improving replicability in single-cell RNA-Seq cell type discovery

DOI: 10.18129/B9.bioc.Dune

Bioconductor version: Release (3.23)

Given a set of clustering labels, Dune merges pairs of clusters to increase mean ARI between labels, improving replicability.

Author: Hector Roux de Bezieux [aut, cre] ORCID: 0000-0002-1489-8339 , Kelly Street [aut]

Maintainer: Hector Roux de Bezieux <hector.rouxdebezieux at berkeley.edu>

Citation (from within R, enter citation("Dune")):

Hector Roux de Bezieux, Kelly Street. Dune: Improving replicability in single-cell RNA-Seq cell type discovery. doi:10.18129/B9.bioc.Dune, R package version 1.24.0, https://bioconductor.org/packages/Dune.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Dune")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Dune")

Details

Package Archives

Follow Installation instructions to use this package in your R session.