Doscheda
A DownStream Chemo-Proteomics Analysis Pipeline
Bioconductor version: 3.23 · Package version: 1.34.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Doscheda focuses on quantitative chemoproteomics used to determine protein interaction profiles of small molecules from whole cell or tissue lysates using Mass Spectrometry data. The package provides a shiny application to run the pipeline, several visualisations and a downloadable report of an experiment.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Doscheda")Details
| Maintainer | Bruno Contrino <br1contrino@yahoo.co.uk> |
| Author | Bruno Contrino, Piero Ricchiuto |
| License | GPL-3 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataImport, MassSpectrometry, Normalization, Preprocessing, Proteomics, QualityControl, Regression, Software |
| Package Short Url | https://bioconductor.org/packages/Doscheda/ |
Citation
From within R, enter citation("Doscheda"):
Bruno Contrino, Piero Ricchiuto. Doscheda: A DownStream Chemo-Proteomics Analysis Pipeline. doi:10.18129/B9.bioc.Doscheda, R package version 1.34.0, https://bioconductor.org/packages/Doscheda.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | Doscheda_1.34.0.tar.gz |
| Windows binary (x86_64) | Doscheda_1.34.0.zip |
| macOS binary (arm64) | Doscheda_1.34.0.tgz |
| macOS binary (x86_64) | Doscheda_1.34.0.tgz |