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ANF

This is the released version of ANF; for the devel version, see ANF.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6

Affinity Network Fusion for Complex Patient Clustering


Bioconductor version: Release (3.23)

This package is used for complex patient clustering by integrating multi-omic data through affinity network fusion.

Author: Tianle Ma, Aidong Zhang

Maintainer: Tianle Ma <tianlema at buffalo.edu>

Citation (from within R, enter citation("ANF")):

Tianle Ma, Aidong Zhang. ANF: Affinity Network Fusion for Complex Patient Clustering. doi:10.18129/B9.bioc.ANF, R package version 1.34.0, https://bioconductor.org/packages/ANF.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ANF")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ANF")
Complex Object (Patient) Clustering with Multi-view Data Using ANF HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews Clustering, GraphAndNetwork, Network, Software
Version1.34.0
In Bioconductor sinceBioC 3.6 (R-3.4) (9 years)
License GPL-3
Depends
Imports igraph, Biobase, survival, MASS, stats, RColorBrewer
System Requirements
URL
See More
Suggests ExperimentHub, SNFtool, knitr, rmarkdown, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me HarmonizedTCGAData
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ANF_1.34.0.tar.gz
Windows Binary (x86_64) ANF_1.34.0.zip
macOS Binary (big-sur-x86_64) ANF_1.34.0.tgz
macOS Binary (sonoma-arm64) ANF_1.34.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/ANF
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/ANF
Package Short Url https://bioconductor.org/packages/ANF/
Package Downloads ReportDownload Stats