antiProfilesData

Normal colon and cancer preprocessed affy data for antiProfile building.

Bioconductor version: Release (2.14)

Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the 'frma' package

Author: Hector Corrada Bravo, Matthew McCall and Rafael A. Irizarry

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("antiProfilesData")

To cite this package in a publication, start R and enter:

    citation("antiProfilesData")

Documentation

PDF   Reference Manual

Details

biocViews Cancer, ExperimentData, NormalTissue, RNAExpressionData
Version 1.0.0
License Artistic-2.0
Depends Biobase
Imports
Suggests frma, GEOquery, GEOmetadb
System Requirements
URL
Depends On Me
Imports Me
Suggests Me antiProfiles, epivizr, messina

Package Downloads

Package Source antiProfilesData_1.0.0.tar.gz
Windows Binary antiProfilesData_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) antiProfilesData_1.0.0.tgz
Mac OS X 10.9 (Mavericks) antiProfilesData_1.0.0.tgz
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Fred Hutchinson Cancer Research Center