netresponse

netresponse: functional network analysis

Bioconductor version: Release (2.14)

Algorithms for functional network analysis. Includes an implementation of a variational Dirichlet process Gaussian mixture model for nonparametric mixture modeling.

Author: Leo Lahti, Olli-Pekka Huovilainen, Antonio Gusmao and Juuso Parkkinen

Maintainer: Leo Lahti <leo.lahti at iki.fi>

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("netresponse")

Citation (from within R, enter citation("netresponse")):

Documentation

PDF R Script netresponse
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews CellBiology, Clustering, DifferentialExpression, GeneExpression, Genetics, GraphAndNetwork, Microarray, Network, Software, Transcription
Version 1.16.0
In Bioconductor since BioC 2.7 (R-2.12)
License GPL (>=2)
Depends R (>= 2.15.1), dmt, igraph, infotheo, ggplot2, graph, mclust, methods, minet, parallel, qvalue, RColorBrewer, reshape, Rgraphviz
Imports
Suggests
System Requirements
URL https://github.com/antagomir/netresponse
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source netresponse_1.16.0.tar.gz
Windows Binary netresponse_1.16.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) netresponse_1.16.0.tgz
Mac OS X 10.9 (Mavericks) netresponse_1.16.0.tgz
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