DOI: 10.18129/B9.bioc.gwascat    

This is the development version of gwascat; for the stable release version, see gwascat.

representing and modeling data in the EMBL-EBI GWAS catalog

Bioconductor version: Development (3.15)

Represent and model data in the EMBL-EBI GWAS catalog.

Author: VJ Carey <stvjc at>

Maintainer: VJ Carey <stvjc at>

Citation (from within R, enter citation("gwascat")):


To install this package, start R (version "4.2") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


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biocViews Genetics, Software
Version 2.27.0
In Bioconductor since BioC 2.10 (R-2.15) (9.5 years)
License Artistic-2.0
Depends R (>= 3.5.0), methods
Imports S4Vectors(>= 0.9.25), IRanges, GenomeInfoDb, GenomicRanges(>= 1.29.6), GenomicFeatures, readr, Biostrings, AnnotationDbi, BiocFileCache, snpStats, VariantAnnotation, AnnotationHub
Suggests DO.db, DT, knitr, RBGL, testthat, rmarkdown, Gviz, Rsamtools, IRanges, rtracklayer, graph, ggbio, DelayedArray, TxDb.Hsapiens.UCSC.hg19.knownGene,, BiocStyle
Enhances SNPlocs.Hsapiens.dbSNP144.GRCh37
Depends On Me liftOver, vtpnet
Imports Me circRNAprofiler
Suggests Me GenomicScores, hmdbQuery, ldblock, parglms, TFutils
Links To Me
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