To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("simpIntLists")

In most cases, you don't need to download the package archive at all.

simpIntLists

 

The package contains BioGRID interactions for various organisms in a simple format

Bioconductor version: Release (3.1)

The package contains BioGRID interactions for arabidopsis(thale cress), c.elegans, fruit fly, human, mouse, yeast( budding yeast ) and S.pombe (fission yeast) . Entrez ids, official names and unique ids can be used to find proteins. The format of interactions are lists. For each gene/protein, there is an entry in the list with "name" containing name of the gene/protein and "interactors" containing the list of genes/proteins interacting with it.

Author: Kircicegi Korkmaz, Volkan Atalay, Rengul Cetin-Atalay

Maintainer: Kircicegi Korkmaz <e102771 at ceng.metu.edu.tr>

Citation (from within R, enter citation("simpIntLists")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("simpIntLists")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("simpIntLists")

 

PDF R Script simpIntLists
PDF   Reference Manual

Details

biocViews Arabidopsis_thaliana_Data, ExperimentData
Version 1.4.0
License GPL (>= 2)
Depends
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Depends On Me ibh
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source simpIntLists_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/simpIntLists/
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