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A package for de novo CNV detection in case-parent trios

Bioconductor version: Release (3.0)

Analysis of de novo copy number variants in trios from high-dimensional genotyping platforms

Author: Robert B Scharpf and Ingo Ruczinski

Maintainer: Robert B Scharpf <rscharpf at>

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PDF R Script Detection of de novo copy number alterations in case-parent trios
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Text   NEWS


biocViews CopyNumberVariation, Microarray, SNP, Software
Version 1.10.2
In Bioconductor since BioC 2.10 (R-2.15)
License Artistic-2.0
Depends R (>= 3.01)
Imports oligoClasses, S4Vectors, VanillaICE(>= 1.28.1), Biobase, DNAcopy, BiocGenerics, ff, foreach, matrixStats, IRanges, lattice, GenomicRanges(>= 1.18.1), GenomeInfoDb, data.table, grid
Suggests human610quadv1bCrlmm(>= 1.0.3), SNPchip, RUnit
Depends On Me
Imports Me
Suggests Me

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