DOI: 10.18129/B9.bioc.tRNA    

This is the development version of tRNA; for the stable release version, see tRNA.

tRNA: Analyzing tRNA sequences and structures

Bioconductor version: Development (3.9)

The tRNA package allows tRNA sequences and structures to be accessed and used for subsetting. In addition, it provides visualization tools to compare feature parameters of multiple tRNA sets and correlate them to additional data. The tRNA package uses GRanges objects as inputs requiring only few additional column data sets.

Author: Felix GM Ernst [aut, cre]

Maintainer: Felix GM Ernst < at>

Citation (from within R, enter citation("tRNA")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("tRNA", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script tRNA
PDF   Reference Manual
Text   NEWS


biocViews Software, Visualization
Version 1.1.0
License GPL-3 + file LICENSE
Depends R (>= 3.5), GenomicRanges
Imports stringr, S4Vectors, methods, assertive, BiocGenerics, IRanges, XVector, Biostrings, ggplot2, scales
Suggests knitr, rmarkdown, testthat, BiocStyle, tRNAscanImport
Depends On Me tRNAdbImport, tRNAscanImport
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package tRNA_1.1.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan) tRNA_1.1.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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