GeneOverlap

Test and visualize gene overlaps

Bioconductor version: Development (3.0)

Test two sets of gene lists and visualize the results.

Author: Li Shen, Mount Sinai <shenli.sam at gmail.com>

Maintainer: Li Shen, Mount Sinai <shenli.sam at gmail.com>

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GeneOverlap")

Citation (from within R, enter citation("GeneOverlap")):

Documentation

PDF R Script Testing and visualizing gene overlaps with the "GeneOverlap" package
PDF   Reference Manual

Details

biocViews MultipleComparison, Software, Visualization
Version 1.1.0
In Bioconductor since BioC 2.14 (R-3.1)
License GPL-3
Depends
Imports stats, RColorBrewer, gplots, methods
Suggests RUnit, BiocGenerics, BiocStyle
System Requirements
URL http://shenlab-sinai.github.io/shenlab-sinai/
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source GeneOverlap_1.1.0.tar.gz
Windows Binary GeneOverlap_1.1.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) GeneOverlap_1.1.0.tgz
Mac OS X 10.9 (Mavericks) GeneOverlap_1.1.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center