GeneOverlap
This is the released version of GeneOverlap; for the devel version, see GeneOverlap.
All Bioconductor versions of GeneOverlap
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14
Test and visualize gene overlaps
Bioconductor version: 3.23 · Package version: 1.48.0
Test two sets of gene lists and visualize the results.
Author: Li Shen, Icahn School of Medicine at Mount Sinai <shenli.sam at gmail.com>
Maintainer: Ant<c3><b3>nio Miguel de Jesus Domingues, Max-Planck Institute for Cell Biology and Genetics <amjdomingues at gmail.com>
Citation
From within R, enter citation("GeneOverlap"):
Li Shen, Icahn School of Medicine at Mount Sinai. GeneOverlap: Test and visualize gene overlaps. doi:10.18129/B9.bioc.GeneOverlap, R package version 1.48.0, https://bioconductor.org/packages/GeneOverlap.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GeneOverlap")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.48.0 |
| License | GPL-3 |
| URL | http://shenlab-sinai.github.io/shenlab-sinai/ |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 2.14 (R-3.1) (12 years) |
| Downloads rank | 272 of 2,418 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | MultipleComparison, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/GeneOverlap/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GeneOverlap")| Testing and visualizing gene overlaps with the "GeneOverlap" package | R Script | |
| Reference Manual |
Download
Follow the installation instructions to use this package in your R session.
| Source package | GeneOverlap_1.48.0.tar.gz |
| Windows binary (x86_64) | GeneOverlap_1.48.0.zip |
| macOS binary (arm64) | GeneOverlap_1.48.0.tgz |
| macOS binary (x86_64) | GeneOverlap_1.48.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/GeneOverlap |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GeneOverlap |
| Package Downloads Report | Download Stats |