DOI: 10.18129/B9.bioc.qsmooth    

Smooth quantile normalization

Bioconductor version: Release (3.14)

Smooth quantile normalization is a generalization of quantile normalization, which is average of the two types of assumptions about the data generation process: quantile normalization and quantile normalization between groups.

Author: Stephanie C. Hicks [aut, cre] , Kwame Okrah [aut], Koen Van den Berge [ctb], Hector Corrada Bravo [aut] , Rafael Irizarry [aut]

Maintainer: Stephanie C. Hicks <shicks19 at jhu.edu>

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biocViews BatchEffect, Microarray, MultipleComparison, Normalization, Preprocessing, RNASeq, Sequencing, Software
Version 1.10.0
In Bioconductor since BioC 3.9 (R-3.6) (2.5 years)
License CC BY 4.0
Depends R (>= 4.0)
Imports SummarizedExperiment, utils, sva, stats, methods, graphics, Hmisc
Suggests bodymapRat, quantro, knitr, rmarkdown, BiocStyle, testthat
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