To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("plier")

In most cases, you don't need to download the package archive at all.

plier

 

Implements the Affymetrix PLIER algorithm

Bioconductor version: Release (3.1)

The PLIER (Probe Logarithmic Error Intensity Estimate) method produces an improved signal by accounting for experimentally observed patterns in probe behavior and handling error at the appropriately at low and high signal values.

Author: Affymetrix Inc., Crispin J Miller, PICR

Maintainer: Crispin Miller <cmiller at picr.man.ac.uk>

Citation (from within R, enter citation("plier")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("plier")

Documentation

PDF   Reference Manual
Text   README

Details

biocViews Software
Version 1.38.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 10 years)
License GPL (>= 2)
Depends R (>= 2.0), methods
Imports affy, Biobase, methods
LinkingTo
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SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me piano
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source plier_1.38.0.tar.gz
Windows Binary plier_1.38.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) plier_1.38.0.tgz
Mac OS X 10.9 (Mavericks) plier_1.38.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/plier/tree/release-3.1
Package Short Url http://bioconductor.org/packages/plier/
Package Downloads Report Download Stats

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