gcrma

Background Adjustment Using Sequence Information

Bioconductor version: Release (2.14)

Background adjustment using sequence information

Author: Jean(ZHIJIN) Wu, Rafael Irizarry with contributions from James MacDonald <jmacdon at med.umich.edu> Jeff Gentry

Maintainer: Z. Wu <zwu at stat.brown.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("gcrma")

To cite this package in a publication, start R and enter:

    citation("gcrma")

Documentation

PDF R Script gcrma1.2
PDF   Reference Manual
Text   NEWS

Details

biocViews Microarray, OneChannel, Preprocessing, Software
Version 2.36.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License LGPL
Depends R (>= 2.6.0), affy(>= 1.23.2), graphics, methods, stats, utils
Imports Biobase, affy(>= 1.23.2), affyio(>= 1.13.3), XVector, Biostrings(>= 2.11.32), splines, BiocInstaller
Suggests affydata, tools, splines, hgu95av2cdf, hgu95av2probe
System Requirements
URL
Depends On Me affyILM, affylmGUI, affyPLM, bgx, maPredictDSC, maskBAD, simpleaffy, webbioc
Imports Me affycoretools, simpleaffy, virtualArray
Suggests Me AffyExpress, ArrayTools, BiocCaseStudies, panp

Package Downloads

Package Source gcrma_2.36.0.tar.gz
Windows Binary gcrma_2.36.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) gcrma_2.36.0.tgz
Mac OS X 10.9 (Mavericks)
Package Downloads Report Download Stats

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