To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cleaver")

In most cases, you don't need to download the package archive at all.

cleaver

Cleavage of polypeptide sequences

Bioconductor version: Release (2.14)

In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html

Author: Sebastian Gibb [aut, cre]

Maintainer: Sebastian Gibb <mail at sebastiangibb.de>

To install this package, start R and enter:

Citation (from within R, enter citation("cleaver")):

Installation

source("http://bioconductor.org/biocLite.R")
biocLite("cleaver")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cleaver")

 

PDF R Script in-silico cleavage of polypeptides
PDF   Reference Manual
Text   NEWS

Details

biocViews Proteomics, Software
Version 1.2.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL (>= 3)
Depends R (>= 3.0.0), methods, Biostrings(>= 1.29.8)
Imports IRanges
Suggests testthat (>= 0.8), knitr, BiocStyle(>= 0.0.14), BRAIN, UniProt.ws(>= 2.1.4)
System Requirements
URL https://github.com/sgibb/cleaver/
Depends On Me
Imports Me synapter
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source cleaver_1.2.0.tar.gz
Windows Binary cleaver_1.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) cleaver_1.2.0.tgz
Mac OS X 10.9 (Mavericks) cleaver_1.2.0.tgz
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