To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("biocGraph")

In most cases, you don't need to download the package archive at all.

biocGraph

Graph examples and use cases in Bioinformatics

Bioconductor version: Release (2.14)

This package provides examples and code that make use of the different graph related packages produced by Bioconductor.

Author: Li Long <li.long at isb-sib.ch>, Robert Gentleman <rgentlem at fhcrc.org>, Seth Falcon <sethf at fhcrc.org> Florian Hahne <fhahne at fhcrc.org>

Maintainer: Florian Hahne <florian.hahne at novartis.com>

Citation (from within R, enter citation("biocGraph")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("biocGraph")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biocGraph")

 

PDF R Script Examples of plotting graphs Using Rgraphviz
PDF R Script HOWTO layout pathways
PDF   Reference Manual

Details

biocViews GraphAndNetwork, Software, Visualization
Version 1.26.0
In Bioconductor since BioC 2.1 (R-2.6)
License Artistic-2.0
Depends Rgraphviz, graph
Imports Rgraphviz, geneplotter, graph, BiocGenerics, methods
Suggests fibroEset, geneplotter, hgu95av2.db
System Requirements
URL
Depends On Me
Imports Me
Suggests Me BiocCaseStudies

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source biocGraph_1.26.0.tar.gz
Windows Binary biocGraph_1.26.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) biocGraph_1.26.0.tgz
Mac OS X 10.9 (Mavericks) biocGraph_1.26.0.tgz
Browse/checkout source (username/password: readonly)
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