To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("LiquidAssociation")

In most cases, you don't need to download the package archive at all.

LiquidAssociation

LiquidAssociation

Bioconductor version: Release (2.14)

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Author: Yen-Yi Ho <yho at jhsph.edu>

Maintainer: Yen-Yi Ho <yho at jhsph.edu>

Citation (from within R, enter citation("LiquidAssociation")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("LiquidAssociation")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LiquidAssociation")

 

PDF R Script LiquidAssociation Vignette
PDF   Reference Manual

Details

biocViews CellBiology, GeneExpression, Genetics, Network, Pathways, Software, TimeCourse
Version 1.18.0
In Bioconductor since BioC 2.5 (R-2.10)
License GPL (>=3)
Depends geepack, methods, yeastCC, org.Sc.sgd.db
Imports Biobase, graphics, grDevices, methods, stats
Suggests
System Requirements
URL
Depends On Me fastLiquidAssociation
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source LiquidAssociation_1.18.0.tar.gz
Windows Binary LiquidAssociation_1.18.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) LiquidAssociation_1.18.0.tgz
Mac OS X 10.9 (Mavericks) LiquidAssociation_1.18.0.tgz
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