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CNORfeeder

This is the released version of CNORfeeder; for the devel version, see CNORfeeder.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12

Integration of CellNOptR to add missing links

DOI: 10.18129/B9.bioc.CNORfeeder

Bioconductor version: Release (3.23)

This package integrates literature-constrained and data-driven methods to infer signalling networks from perturbation experiments. It permits to extends a given network with links derived from the data via various inference methods and uses information on physical interactions of proteins to guide and validate the integration of links.

Author: Federica Eduati [aut, cre]

Maintainer: Attila Gabor <attila.gabor at uni-heidelberg.de>

Citation (from within R, enter citation("CNORfeeder")):

Federica Eduati. CNORfeeder: Integration of CellNOptR to add missing links. doi:10.18129/B9.bioc.CNORfeeder, R package version 1.52.0, https://bioconductor.org/packages/CNORfeeder.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CNORfeeder")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CNORfeeder")

Details

Package Archives

Follow Installation instructions to use this package in your R session.