To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BEAT")

In most cases, you don't need to download the package archive at all.

BEAT

 

BEAT - BS-Seq Epimutation Analysis Toolkit

Bioconductor version: Release (3.1)

Model-based analysis of single-cell methylation data

Author: Kemal Akman <akman at mpipz.mpg.de>

Maintainer: Kemal Akman <akman at mpipz.mpg.de>

Citation (from within R, enter citation("BEAT")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BEAT")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BEAT")

 

PDF R Script Analysing single-cell BS-Seq data with the "BEAT" package
PDF   Reference Manual

Details

biocViews DNAMethylation, Epigenetics, Genetics, MethylSeq, Software
Version 1.6.0
In Bioconductor since BioC 2.14 (R-3.1) (1.5 years)
License LGPL (>= 3.0)
Depends R (>= 2.13.0)
Imports GenomicRanges, ShortRead, Biostrings, BSgenome
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Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BEAT_1.6.0.tar.gz
Windows Binary BEAT_1.6.0.zip
Mac OS X 10.6 (Snow Leopard) BEAT_1.6.0.tgz
Mac OS X 10.9 (Mavericks) BEAT_1.6.0.tgz
Subversion source (username/password: readonly)
GitHub source https://github.com/Bioconductor-mirror/BEAT/tree/release-3.1
Package Short Url http://bioconductor.org/packages/BEAT/
Package Downloads Report Download Stats

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