BEAT

DOI: 10.18129/B9.bioc.BEAT    

BEAT - BS-Seq Epimutation Analysis Toolkit

Bioconductor version: Release (3.7)

Model-based analysis of single-cell methylation data

Author: Kemal Akman <akman at mpipz.mpg.de>

Maintainer: Kemal Akman <akman at mpipz.mpg.de>

Citation (from within R, enter citation("BEAT")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BEAT")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BEAT")

 

PDF R Script Analysing single-cell BS-Seq data with the "BEAT" package
PDF   Reference Manual

Details

biocViews DNAMethylation, Epigenetics, Genetics, MethylSeq, Software
Version 1.18.0
In Bioconductor since BioC 2.14 (R-3.1) (4.5 years)
License LGPL (>= 3.0)
Depends R (>= 2.13.0)
Imports GenomicRanges, ShortRead, Biostrings, BSgenome
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BEAT_1.18.0.tar.gz
Windows Binary BEAT_1.18.0.zip
Mac OS X 10.11 (El Capitan) BEAT_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BEAT
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BEAT
Package Short Url http://bioconductor.org/packages/BEAT/
Package Downloads Report Download Stats

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