BSgenome.Hsapiens.1000genomes.hs37d5

DOI: 10.18129/B9.bioc.BSgenome.Hsapiens.1000genomes.hs37d5    

This is the development version of BSgenome.Hsapiens.1000genomes.hs37d5; for the stable release version, see BSgenome.Hsapiens.1000genomes.hs37d5.

1000genomes Reference Genome Sequence (hs37d5)

Bioconductor version: Development (3.13)

1000genomes Phase2 Reference Genome Sequence (hs37d5), based on NCBI GRCh37.

Author: Julian Gehring

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("BSgenome.Hsapiens.1000genomes.hs37d5")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BSgenome.Hsapiens.1000genomes.hs37d5")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Homo_sapiens
Version 0.99.1
License Artistic-2.0
Depends BSgenome(>= 1.34.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me SomaticSignatures, SparseSignatures, VariantFiltering
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Hsapiens.1000genomes.hs37d5_0.99.1.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url https://bioconductor.org/packages/BSgenome.Hsapiens.1000genomes.hs37d5/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: