To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("rols")

In most cases, you don't need to download the package archive at all.

rols

 

   

This is the development version of rols; for the stable release version, see rols.

An R interface to the Ontology Lookup Service

Bioconductor version: Development (3.5)

An interface to the Ontology Lookup Service (OLS) to access and query hundred of ontolgies directly from R.

Author: Laurent Gatto <lg390 at cam.ac.uk>, with contributions from Tiago Chedraoui Silva.

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>

Citation (from within R, enter citation("rols")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("rols")

Documentation

HTML R Script The rols interface to the Ontology Lookup Service
PDF   Reference Manual
Text   NEWS

Details

biocViews Annotation, GO, MassSpectrometry, Software
Version 2.3.1
In Bioconductor since BioC 2.11 (R-2.15) (4 years)
License GPL-2
Depends methods
Imports httr, progress, jsonlite, utils, Biobase
LinkingTo
Suggests GO.db, knitr (>= 1.1.0), BiocStyle, testthat, lubridate, DT, rmarkdown
SystemRequirements
Enhances
URL http://lgatto.github.com/rols/
BugReports https://github.com/lgatto/rols/issues
Depends On Me
Imports Me
Suggests Me MSnbase, RforProteomics
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source rols_2.3.1.tar.gz
Windows Binary rols_2.3.1.zip
Mac OS X 10.9 (Mavericks) rols_2.3.1.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/rols
Package Short Url http://bioconductor.org/packages/rols/
Package Downloads Report Download Stats

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