DOI: 10.18129/B9.bioc.canceR    

This is the development version of canceR; for the stable release version, see canceR.

A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC.

Bioconductor version: Development (3.7)

The package is user friendly interface based on the cgdsr and other modeling packages to explore, compare, and analyse all available Cancer Data (Clinical data, Gene Mutation, Gene Methylation, Gene Expression, Protein Phosphorylation, Copy Number Alteration) hosted by the Computational Biology Center at Memorial-Sloan-Kettering Cancer Center (MSKCC).

Author: Karim Mezhoud. Nuclear Safety & Security Department. Nuclear Science Center of Tunisia.

Maintainer: Karim Mezhoud <kmezhoud at>

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PDF canceR Vignette
PDF   Reference Manual
Text   NEWS


biocViews GUI, GeneExpression, Software
Version 1.11.0
In Bioconductor since BioC 3.1 (R-3.2) (3 years)
License GPL-2
Depends R (>= 3.3), tcltk, tcltk2, cgdsr
Imports GSEABase, GSEAlm, tkrplot, geNetClassifier, RUnit, Formula, rpart, survival, Biobase, phenoTest, circlize, plyr, graphics, stats, utils
Suggests testthat (>= 0.10.0), R.rsp
Depends On Me
Imports Me
Suggests Me
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Source Package canceR_1.11.0.tar.gz
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