RCyjs
This is the development version of RCyjs; for the stable release version, see RCyjs.
Display and manipulate graphs in cytoscape.js
Bioconductor version: Development (3.19)
Interactive viewing and exploration of graphs, connecting R to Cytoscape.js, using websockets.
Author: Paul Shannon
Maintainer: Paul Shannon <paul.thurmond.shannon at gmail.com>
Citation (from within R, enter
citation("RCyjs")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("RCyjs")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | GraphAndNetwork, Software, ThirdPartyClient, Visualization |
| Version | 2.25.0 |
| In Bioconductor since | BioC 3.1 (R-3.2) (9 years) |
| License | MIT + file LICENSE |
| Depends | R (>= 3.5.0), BrowserViz(>= 2.7.18), graph(>= 1.56.0) |
| Imports | methods, httpuv (>= 1.5.0), BiocGenerics, base64enc, utils |
| System Requirements | |
| URL |
See More
| Suggests | RUnit, BiocStyle, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/RCyjs |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RCyjs |
| Package Short Url | https://bioconductor.org/packages/RCyjs/ |
| Package Downloads Report | Download Stats |