Guitar
This is the development version of Guitar; for the stable release version, see Guitar.
Guitar
Bioconductor version: Development (3.23)
The package is designed for visualization of RNA-related genomic features with respect to the landmarks of RNA transcripts, i.e., transcription starting site, start codon, stop codon and transcription ending site.
Author: Xiao Du, Hui Liu, Lin Zhang, Jia Meng
Maintainer: Jia Meng <jia.meng at xjtlu.edu.cn>
Citation (from within R, enter
citation("Guitar")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("Guitar")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Alignment, DataImport, MethylSeq, QualityControl, RNASeq, Sequencing, Software, SplicedAlignment, Transcription |
| Version | 2.25.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (10 years) |
| License | GPL-2 |
| Depends | GenomicFeatures, rtracklayer, AnnotationDbi, GenomicRanges, magrittr, ggplot2, methods, stats, utils, knitr, dplyr |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/Guitar |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Guitar |
| Package Short Url | https://bioconductor.org/packages/Guitar/ |
| Package Downloads Report | Download Stats |