To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Guitar")

In most cases, you don't need to download the package archive at all.

Guitar

 

   

Guitar

Bioconductor version: Release (3.5)

The package is designed for visualization of RNA-related genomic features with respect to the landmarks of RNA transcripts, i.e., transcription starting site, start codon, stop codon and transcription ending site.

Author: Jia Meng

Maintainer: Jia Meng <jia.meng at xjtlu.edu.cn>

Citation (from within R, enter citation("Guitar")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Guitar")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Guitar")

 

PDF R Script Sample Guitar workflow
PDF   Reference Manual
Text   NEWS

Details

biocViews Alignment, Coverage, DataImport, MethylSeq, QualityControl, RNASeq, Sequencing, Software, SplicedAlignment, Transcription
Version 1.14.0
In Bioconductor since BioC 3.2 (R-3.2) (1.5 years)
License GPL-2
Depends Rsamtools, GenomicFeatures, rtracklayer, GenomicAlignments, GenomicRanges, ggplot2, grid, IRanges
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Guitar_1.14.0.tar.gz
Windows Binary Guitar_1.14.0.zip
Mac OS X 10.11 (El Capitan) Guitar_1.14.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/Guitar/tree/release-3.5
Package Short Url http://bioconductor.org/packages/Guitar/
Package Downloads Report Download Stats

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