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source("http://bioconductor.org/biocLite.R")
biocLite("SomaticCancerAlterations")

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SomaticCancerAlterations

 

Somatic Cancer Alterations

Bioconductor version: Release (3.1)

Collection of somatic cancer alteration datasets

Author: Julian Gehring (EMBL Heidelberg)

Maintainer: Julian Gehring <julian.gehring at embl.de>

Citation (from within R, enter citation("SomaticCancerAlterations")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SomaticCancerAlterations")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SomaticCancerAlterations")

 

PDF R Script SomaticCancerAlterations - PDF
HTML R Script SomaticCancerAlterations - HTML
PDF   Reference Manual

Details

biocViews CancerData, ExperimentData, Genome, NCI, Project1000genomes
Version 1.4.0
License GPL-3
Depends R (>= 3.0.0)
Imports GenomicRanges, exomeCopy, stringr, IRanges
LinkingTo
Suggests testthat, ggbio, ggplot2, BiocStyle, knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me SomaticSignatures
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source SomaticCancerAlterations_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
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