To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KEGGdzPathwaysGEO")

In most cases, you don't need to download the package archive at all.

KEGGdzPathwaysGEO

KEGG Disease Datasets from GEO

Bioconductor version: Release (3.1)

This is a collection of 24 data sets for which the phenotype is a disease with a corresponding pathway in the KEGG database.This collection of datasets were used as gold standard in comparing gene set analysis methods by the PADOG package.

Author: Gaurav Bhatti, Adi L. Tarca

Maintainer: Gaurav Bhatti <gbhatti at med.wayne.edu>

Citation (from within R, enter citation("KEGGdzPathwaysGEO")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KEGGdzPathwaysGEO")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, GEO, MicroarrayData
Version 1.5.1
License GPL-2
Depends R (>= 2.13.0)
Imports Biobase, BiocGenerics
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me PADOG
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source KEGGdzPathwaysGEO_1.5.1.tar.gz
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