To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("COHCAPanno")

In most cases, you don't need to download the package archive at all.

COHCAPanno

Annotations for City of Hope CpG Island Analysis Pipeline

Bioconductor version: Release (3.1)

Provides genomic location, nearby CpG island and nearby gene information for common Illumina methylation array platforms

Author: Charles Warden

Maintainer: Charles Warden <cwarden45 at gmail.com>

Citation (from within R, enter citation("COHCAPanno")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("COHCAPanno")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("COHCAPanno")

 

PDF R Script COHCAPanno Vignette
PDF   Reference Manual

Details

biocViews ArrayExpress, CpGIslandData, ExperimentData, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version 1.3.1
License GPL-3
Depends R (>= 2.10)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me COHCAP
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source COHCAPanno_1.3.1.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

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