BSgenome.Rnorvegicus.UCSC.rn5

DOI: 10.18129/B9.bioc.BSgenome.Rnorvegicus.UCSC.rn5    

Full genome sequences for Rattus norvegicus (UCSC version rn5)

Bioconductor version: Release (3.8)

Full genome sequences for Rattus norvegicus (Rat) as provided by UCSC (rn5, Mar. 2012) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Rnorvegicus.UCSC.rn5")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("BSgenome.Rnorvegicus.UCSC.rn5", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Rattus_norvegicus
Version 1.4.0
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
LinkingTo
Suggests TxDb.Rnorvegicus.UCSC.rn5.refGene
SystemRequirements
Enhances
URL
Depends On Me BSgenome.Rnorvegicus.UCSC.rn5.masked
Imports Me BSgenome.Rnorvegicus.UCSC.rn5.masked
Suggests Me BSgenome
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Rnorvegicus.UCSC.rn5_1.4.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/BSgenome.Rnorvegicus.UCSC.rn5/
Package Downloads Report Download Stats

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