To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Rnorvegicus.UCSC.rn5")

In most cases, you don't need to download the package archive at all.

BSgenome.Rnorvegicus.UCSC.rn5

Full genome sequences for Rattus norvegicus (UCSC version rn5)

Bioconductor version: Release (3.0)

Full genome sequences for Rattus norvegicus (Rat) as provided by UCSC (rn5, Mar. 2012) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Rnorvegicus.UCSC.rn5")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Rnorvegicus.UCSC.rn5")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Rattus_norvegicus
Version 1.4.0
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
Suggests TxDb.Rnorvegicus.UCSC.rn5.refGene
System Requirements
URL
Depends On Me BSgenome.Rnorvegicus.UCSC.rn5.masked
Imports Me BSgenome.Rnorvegicus.UCSC.rn5.masked
Suggests Me BSgenome

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Rnorvegicus.UCSC.rn5_1.4.0.tar.gz
Windows Binary BSgenome.Rnorvegicus.UCSC.rn5_1.3.99.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Rnorvegicus.UCSC.rn5_1.3.99.tgz
Mac OS X 10.9 (Mavericks) BSgenome.Rnorvegicus.UCSC.rn5_1.3.99.tgz
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