ssviz

DOI: 10.18129/B9.bioc.ssviz    

A small RNA-seq visualizer and analysis toolkit

Bioconductor version: Release (3.7)

Small RNA sequencing viewer

Author: Diana Low

Maintainer: Diana Low <lowdiana at gmail.com>

Citation (from within R, enter citation("ssviz")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
        source("https://bioconductor.org/biocLite.R")
        biocLite("ssviz")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ssviz")

 

PDF R Script ssviz
PDF   Reference Manual
Text   NEWS

Details

biocViews Genetics, MultipleComparison, RNASeq, Sequencing, Software, Visualization
Version 1.14.0
In Bioconductor since BioC 3.0 (R-3.1) (4 years)
License GPL-2
Depends R (>= 2.15.1), methods, Rsamtools, Biostrings, reshape, ggplot2, RColorBrewer, stats
Imports
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ssviz_1.14.0.tar.gz
Windows Binary ssviz_1.14.0.zip
Mac OS X 10.11 (El Capitan) ssviz_1.14.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ssviz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ssviz
Package Short Url http://bioconductor.org/packages/ssviz/
Package Downloads Report Download Stats

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