To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("iPAC")

In most cases, you don't need to download the package archive at all.

iPAC

Identification of Protein Amino acid Clustering

Bioconductor version: Release (2.14)

iPAC is a novel tool to identify somatic amino acid mutation clustering within proteins while taking into account protein structure.

Author: Gregory Ryslik, Hongyu Zhao

Maintainer: Gregory Ryslik <gregory.ryslik at yale.edu>

To install this package, start R and enter:

Citation (from within R, enter citation("iPAC")):

Installation

source("http://bioconductor.org/biocLite.R")
biocLite("iPAC")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iPAC")

 

PDF R Script iPAC: identification of Protein Amino acid Mutations
PDF   Reference Manual
Text   NEWS

Details

biocViews Clustering, Proteomics, Software
Version 1.8.0
In Bioconductor since BioC 2.11 (R-2.15)
License GPL-2
Depends R (>= 2.15), gdata, scatterplot3d, Biostrings, multtest
Imports
Suggests
System Requirements
URL
Depends On Me GraphPAC, SpacePAC
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source iPAC_1.8.0.tar.gz
Windows Binary iPAC_1.8.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) iPAC_1.8.0.tgz
Mac OS X 10.9 (Mavericks) iPAC_1.8.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center