To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowAI")

In most cases, you don't need to download the package archive at all.

flowAI

 

   

Automatic and interactive quality control for flow cytometry data

Bioconductor version: Release (3.5)

The package is able to perform an automatic or interactive quality control on FCS data acquired using flow cytometry instruments. By evaluating three different properties: 1) flow rate, 2) signal acquisition, 3) dynamic range, the quality control enables the detection and removal of anomalies.

Author: Gianni Monaco, Hao Chen

Maintainer: Gianni Monaco <gianni at liverpool.ac.uk>

Citation (from within R, enter citation("flowAI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowAI")

Documentation

HTML R Script Automatic and GUI methods to do quality control on Flow cytometry Data
PDF   Reference Manual
Text   NEWS

Details

biocViews BiomedicalInformatics, FlowCytometry, QualityControl, Software
Version 1.4.3
In Bioconductor since BioC 3.3 (R-3.3) (1 year)
License GPL
Depends R (>= 3.4)
Imports ggplot2, flowCore, plyr, changepoint, knitr, reshape2, RColorBrewer, scales, methods, graphics, stats, utils
LinkingTo
Suggests testthat, shiny, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source flowAI_1.4.3.tar.gz
Windows Binary flowAI_1.4.3.zip
Mac OS X 10.11 (El Capitan) flowAI_1.4.3.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/flowAI/tree/release-3.5
Package Short Url http://bioconductor.org/packages/flowAI/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: