eiR

Accelerated similarity searching of small molecules

Bioconductor version: Release (2.14)

The eiR package provides utilities for accelerated structure similarity searching of very large small molecule data sets using an embedding and indexing approach.

Author: Kevin Horan

Maintainer: Kevin Horan <khoran at cs.ucr.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("eiR")

To cite this package in a publication, start R and enter:

    citation("eiR")

Documentation

HTML R Script eiR
PDF   Reference Manual
Text   README
Text   NEWS
Text   LICENSE

Details

biocViews Clustering, DataImport, Infrastructure, Proteomics, Software
Version 1.4.0
In Bioconductor since BioC 2.12 (R-3.0)
License Artistic-2.0
Depends R (>= 2.10.0), ChemmineR(>= 2.15.15), methods, DBI
Imports snow, tools, snowfall, RUnit, methods, ChemmineR, RCurl, digest, BiocGenerics
Suggests RCurl, snow, BiocStyle, knitcitations, knitr
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source eiR_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard) eiR_1.4.0.tgz
Mac OS X 10.9 (Mavericks)
Package Downloads Report Download Stats

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