To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("eiR")

In most cases, you don't need to download the package archive at all.

eiR

Accelerated similarity searching of small molecules

Bioconductor version: Release (3.0)

The eiR package provides utilities for accelerated structure similarity searching of very large small molecule data sets using an embedding and indexing approach.

Author: Kevin Horan

Maintainer: Kevin Horan <khoran at cs.ucr.edu>

Citation (from within R, enter citation("eiR")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("eiR")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("eiR")

 

HTML R Script eiR
PDF   Reference Manual
Text   README
Text   NEWS
Text   LICENSE

Details

biocViews Clustering, DataImport, Infrastructure, Proteomics, Software
Version 1.6.0
In Bioconductor since BioC 2.12 (R-3.0)
License Artistic-2.0
Depends R (>= 2.10.0), ChemmineR(>= 2.15.15), methods, DBI
Imports snow, tools, snowfall, RUnit, methods, ChemmineR, RCurl, digest, BiocGenerics
Suggests RCurl, snow, BiocStyle, knitcitations, knitr, knitrBootstrap
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source eiR_1.6.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard) eiR_1.6.0.tgz
Mac OS X 10.9 (Mavericks) eiR_1.6.0.tgz
Browse/checkout source (username/password: readonly)
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