Find chromosome regions showing common gains/losses

Bioconductor version: Release (2.14)

This package provides functions to identify genomic regions of interests based on segmented copy number data from multiple samples.

Author: J. Zhang and B. Feng

Maintainer: J. Zhang <jzhang at>

To install this package, start R and enter:


Citation (from within R, enter citation("cghMCR")):


PDF R Script cghMCR findMCR
PDF   Reference Manual


biocViews CopyNumberVariation, Microarray, Software
Version 1.22.0
In Bioconductor since BioC 1.8 (R-2.3)
License LGPL
Depends methods, DNAcopy, CNTools, limma
Imports BiocGenerics(>= 0.1.6), stats4
System Requirements
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source cghMCR_1.22.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) cghMCR_1.22.0.tgz
Mac OS X 10.9 (Mavericks) cghMCR_1.22.0.tgz
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