To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("apComplex")

In most cases, you don't need to download the package archive at all.

apComplex

Estimate protein complex membership using AP-MS protein data

Bioconductor version: Release (3.0)

Functions to estimate a bipartite graph of protein complex membership using AP-MS data.

Author: Denise Scholtens <dscholtens at northwestern.edu>

Maintainer: Denise Scholtens <dscholtens at northwestern.edu>

Citation (from within R, enter citation("apComplex")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("apComplex")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("apComplex")

 

PDF R Script apComplex
PDF   Reference Manual

Details

biocViews GraphAndNetwork, MassSpectrometry, NetworkInference, Software
Version 2.32.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License LGPL
Depends R (>= 2.10), graph, RBGL
Imports Rgraphviz, stats, org.Sc.sgd.db
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me ScISI
Imports Me
Suggests Me BiocCaseStudies
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source apComplex_2.32.0.tar.gz
Windows Binary apComplex_2.32.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) apComplex_2.32.0.tgz
Mac OS X 10.9 (Mavericks) apComplex_2.32.0.tgz
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