altcdfenvs

alternative CDF environments (aka probeset mappings)

Bioconductor version: Release (2.14)

Convenience data structures and functions to handle cdfenvs

Author: Laurent Gautier <lgautier at gmail.com>

Maintainer: Laurent Gautier <lgautier at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("altcdfenvs")

To cite this package in a publication, start R and enter:

    citation("altcdfenvs")

Documentation

PDF R Script affy primer
PDF R Script affy primer
PDF R Script altcdfenvs
PDF   Reference Manual

Details

biocViews Annotation, Microarray, OneChannel, Preprocessing, ProprietaryPlatforms, QualityControl, Software, Transcription
Version 2.26.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License GPL (>= 2)
Depends R (>= 2.7), methods, BiocGenerics(>= 0.1.0), Biobase(>= 2.15.1), affy, makecdfenv, Biostrings, hypergraph
Imports
Suggests plasmodiumanophelescdf, hgu95acdf, hgu133aprobe, hgu133a.db, hgu133acdf, Rgraphviz, RColorBrewer
System Requirements
URL
Depends On Me
Imports Me Harshlight
Suggests Me

Package Downloads

Package Source altcdfenvs_2.26.0.tar.gz
Windows Binary altcdfenvs_2.26.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) altcdfenvs_2.26.0.tgz
Mac OS X 10.9 (Mavericks)
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