To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("altcdfenvs")

In most cases, you don't need to download the package archive at all.

altcdfenvs

alternative CDF environments (aka probeset mappings)

Bioconductor version: Release (3.0)

Convenience data structures and functions to handle cdfenvs

Author: Laurent Gautier <lgautier at gmail.com>

Maintainer: Laurent Gautier <lgautier at gmail.com>

Citation (from within R, enter citation("altcdfenvs")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("altcdfenvs")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("altcdfenvs")

 

PDF R Script affy primer
PDF R Script affy primer
PDF R Script altcdfenvs
PDF   Reference Manual

Details

biocViews Annotation, Microarray, OneChannel, Preprocessing, ProprietaryPlatforms, QualityControl, Software, Transcription
Version 2.28.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License GPL (>= 2)
Depends R (>= 2.7), methods, BiocGenerics(>= 0.1.0), Biobase(>= 2.15.1), affy, makecdfenv, Biostrings, hypergraph
Imports
LinkingTo
Suggests plasmodiumanophelescdf, hgu95acdf, hgu133aprobe, hgu133a.db, hgu133acdf, Rgraphviz, RColorBrewer
SystemRequirements
Enhances
URL
Depends On Me
Imports Me Harshlight
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source altcdfenvs_2.28.0.tar.gz
Windows Binary altcdfenvs_2.28.0.zip
Mac OS X 10.6 (Snow Leopard) altcdfenvs_2.28.0.tgz
Mac OS X 10.9 (Mavericks) altcdfenvs_2.28.0.tgz
Browse/checkout source (username/password: readonly)
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