To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RTCA")

In most cases, you don't need to download the package archive at all.

RTCA

Open-source toolkit to analyse data from xCELLigence System (RTCA)

Bioconductor version: Release (3.0)

Import, analyze and visualize data from Roche(R) xCELLigence RTCA systems. The package imports real-time cell electrical impedance data into R. As an alternative to commercial software shipped along the system, the Bioconductor package RTCA provides several unique transformation (normalization) strategies and various visualization tools.

Author: Jitao David Zhang

Maintainer: Jitao David Zhang <davidvonpku at gmail.com>

Citation (from within R, enter citation("RTCA")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RTCA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTCA")

 

PDF R Script Introduction to Data Analysis of the Roche xCELLigence System with RTCA Package
PDF R Script RTCAtransformation: Discussion of transformation methods of RTCA data
PDF   Reference Manual
Text   NEWS

Details

biocViews CellBasedAssays, Infrastructure, Software, TimeCourse, Visualization
Version 1.18.0
In Bioconductor since BioC 2.5 (R-2.10)
License LGPL-3
Depends methods, stats, graphics, Biobase, RColorBrewer, gtools
Imports
Suggests xtable
System Requirements
URL http://code.google.com/p/xcelligence/ http://www.xcelligence.roche.com/ http://www.nextbiomotif.com/Home/scientific-programming
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RTCA_1.18.0.tar.gz
Windows Binary RTCA_1.18.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RTCA_1.18.0.tgz
Mac OS X 10.9 (Mavericks) RTCA_1.18.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center