To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("OrganismDbi")

In most cases, you don't need to download the package archive at all.

OrganismDbi

Software to enable the smooth interfacing of different database packages.

Bioconductor version: Release (2.14)

The package enables a simple unified interface to several annotation packages each of which has its own schema by taking advantage of the fact that each of these packages implements a select methods.

Author: Marc Carlson, Herve Pages, Martin Morgan, Valerie Obenchain

Maintainer: Biocore Data Team <maintainer at bioconductor.org>

Citation (from within R, enter citation("OrganismDbi")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("OrganismDbi")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OrganismDbi")

 

PDF R Script OrganismDbi: A meta framework for Annotation Packages
PDF   Reference Manual
Text   NEWS

Details

biocViews Annotation, Infrastructure, Software
Version 1.6.0
In Bioconductor since BioC 2.11 (R-2.15)
License Artistic-2.0
Depends R (>= 2.14.0), methods, AnnotationDbi(>= 1.16.10), GenomicFeatures
Imports BiocGenerics, graph, RBGL, AnnotationDbi
Suggests Homo.sapiens, Rattus.norvegicus, RUnit
System Requirements
URL
Depends On Me Homo.sapiens, Mus.musculus, Rattus.norvegicus
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source OrganismDbi_1.6.0.tar.gz
Windows Binary OrganismDbi_1.6.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) OrganismDbi_1.6.0.tgz
Mac OS X 10.9 (Mavericks) OrganismDbi_1.6.0.tgz
Browse/checkout source (username/password: readonly)
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