OpenStats

DOI: 10.18129/B9.bioc.OpenStats    

A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association

Bioconductor version: Release (3.12)

Package contains several methods for statistical analysis of genotype to phenotype association in high-throughput screening pipelines.

Author: Hamed Haseli Mashhadi

Maintainer: Hamed Haseli Mashhadi <hamedhm at ebi.ac.uk>

Citation (from within R, enter citation("OpenStats")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("OpenStats")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OpenStats")

 

HTML R Script OpenStats
PDF   Reference Manual
Text   NEWS

Details

biocViews BatchEffect, Bayesian, Software, StatisticalMethod
Version 1.2.0
In Bioconductor since BioC 3.11 (R-4.0) (0.5 years)
License GPL (>= 2)
Depends nlme
Imports MASS, jsonlite, Hmisc, methods, knitr, AICcmodavg, car, rlist, summarytools, graphics, stats, utils
LinkingTo
Suggests rmarkdown
SystemRequirements
Enhances
URL https://git.io/Jv5w0
BugReports https://git.io/Jv5wg
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package OpenStats_1.2.0.tar.gz
Windows Binary OpenStats_1.2.0.zip
macOS 10.13 (High Sierra) OpenStats_1.2.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/OpenStats
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/OpenStats
Package Short Url https://bioconductor.org/packages/OpenStats/
Package Downloads Report Download Stats

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