To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MiChip")

In most cases, you don't need to download the package archive at all.

MiChip

 

MiChip Parsing and Summarizing Functions

Bioconductor version: Release (3.1)

This package takes the MiChip miRNA microarray .grp scanner output files and parses these out, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.

Author: Jonathon Blake <blake at embl.de>

Maintainer: Jonathon Blake <blake at embl.de>

Citation (from within R, enter citation("MiChip")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MiChip")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MiChip")

 

PDF R Script MiChip miRNA Microarray Processing
PDF   Reference Manual

Details

biocViews Microarray, Preprocessing, Software
Version 1.22.0
In Bioconductor since BioC 2.5 (R-2.10) (6 years)
License GPL (>= 2)
Depends R (>= 2.3.0), Biobase
Imports Biobase
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source MiChip_1.22.0.tar.gz
Windows Binary MiChip_1.22.0.zip
Mac OS X 10.6 (Snow Leopard) MiChip_1.22.0.tgz
Mac OS X 10.9 (Mavericks) MiChip_1.22.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/MiChip/tree/release-3.1
Package Short Url http://bioconductor.org/packages/MiChip/
Package Downloads Report Download Stats

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