To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MeSHDbi")

In most cases, you don't need to download the package archive at all.

MeSHDbi

DBI to construct MeSH-related package from sqlite file.

Bioconductor version: Release (3.0)

The package is unified implementation of MeSH.db, MeSH.AOR.db, and MeSH.PCR.db and also is interface to construct Gene-MeSH package (org.MeSH.XXX.db). loadMeSHDbiPkg import sqlite file and generate org.MeSH.XXX.db.

Author: Koki Tsuyuzaki

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("MeSHDbi")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MeSHDbi")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MeSHDbi")

 

PDF R Script MeSH.db
PDF   Reference Manual

Details

biocViews Annotation, AnnotationData, Infrastructure, Software
Version 1.2.0
In Bioconductor since BioC 2.14 (R-3.1)
License Artistic-2.0
Depends R (>= 3.0.1)
Imports methods, AnnotationDbi(>= 1.16.10), DBI, RSQLite, IRanges, Biobase, S4Vectors
Suggests RUnit, BiocGenerics
System Requirements
URL
Depends On Me MeSH.AOR.db, MeSH.db, MeSH.PCR.db, meshr, org.MeSH.Aca.db, org.MeSH.Aga.PEST.db, org.MeSH.Ame.db, org.MeSH.Aml.db, org.MeSH.Ana.db, org.MeSH.Ani.FGSC.db, org.MeSH.Ath.db, org.MeSH.Atu.K84.db, org.MeSH.Bfl.db, org.MeSH.Bsu.168.db, org.MeSH.Bsu.Bsn5.db, org.MeSH.Bsu.RONN1.db, org.MeSH.Bsu.TUB10.db, org.MeSH.Bsu.W23.db, org.MeSH.Bta.db, org.MeSH.Cal.SC5314.db, org.MeSH.Cbr.db, org.MeSH.Cel.db, org.MeSH.Cfa.db, org.MeSH.Cin.db, org.MeSH.Cja.db, org.MeSH.Cpo.db, org.MeSH.Cre.db, org.MeSH.Dan.db, org.MeSH.Dda.3937.db, org.MeSH.Ddi.AX4.db, org.MeSH.Der.db, org.MeSH.Dgr.db, org.MeSH.Dme.db, org.MeSH.Dmo.db, org.MeSH.Dpe.db, org.MeSH.Dre.db, org.MeSH.Dse.db, org.MeSH.Dsi.db, org.MeSH.Dvi.db, org.MeSH.Dya.db, org.MeSH.Eco.536.db, org.MeSH.Eco.55989.db, org.MeSH.Eco.APEC01.db, org.MeSH.Eco.B.REL606.db, org.MeSH.Eco.BW2952.db, org.MeSH.Eco.CFT073.db, org.MeSH.Eco.E24377A.db, org.MeSH.Eco.ED1a.db, org.MeSH.Eco.HS.db, org.MeSH.Eco.IAI1.db, org.MeSH.Eco.IAI39.db, org.MeSH.Eco.K12.DH10B.db, org.MeSH.Eco.K12.MG1655.db, org.MeSH.Eco.KO11FL.db, org.MeSH.Eco.O103.H2.12009.db, org.MeSH.Eco.O111.H.11128.db, org.MeSH.Eco.O127.H6.E2348.69.db, org.MeSH.Eco.O157.H7.EC4115.db, org.MeSH.Eco.O157.H7.EDL933.db, org.MeSH.Eco.O157.H7.Sakai.db, org.MeSH.Eco.O157.H7.TW14359.db, org.MeSH.Eco.O26.H11.11368.db, org.MeSH.Eco.O26.H7.CB9615.db, org.MeSH.Eco.S88.db, org.MeSH.Eco.SE11.db, org.MeSH.Eco.SMS35.db, org.MeSH.Eco.UMN026.db, org.MeSH.Eco.UTI89.db, org.MeSH.Eqc.db, org.MeSH.Gga.db, org.MeSH.Gma.db, org.MeSH.Hsa.db, org.MeSH.Laf.db, org.MeSH.Lma.db, org.MeSH.Mdo.db, org.MeSH.Mes.db, org.MeSH.Mga.db, org.MeSH.Miy.db, org.MeSH.Mml.db, org.MeSH.Mmu.db, org.MeSH.Mtr.db, org.MeSH.Nle.db, org.MeSH.Oan.db, org.MeSH.Ocu.db, org.MeSH.Oni.db, org.MeSH.Osa.db, org.MeSH.Pab.db, org.MeSH.Pae.LESB58.db, org.MeSH.Pae.PA14.db, org.MeSH.Pae.PA7.db, org.MeSH.Pae.PAO1.db, org.MeSH.Pfa.3D7.db, org.MeSH.Pto.db, org.MeSH.Ptr.db, org.MeSH.Rno.db, org.MeSH.Sau.COL.db, org.MeSH.Sau.ED98.db, org.MeSH.Sau.M013.db, org.MeSH.Sau.MRSA252.db, org.MeSH.Sau.MSHR1132.db, org.MeSH.Sau.MSSA476.db, org.MeSH.Sau.Mu3.db, org.MeSH.Sau.Mu50.db, org.MeSH.Sau.MW2.db, org.MeSH.Sau.N315.db, org.MeSH.Sau.Newman.db, org.MeSH.Sau.RF122.db, org.MeSH.Sau.USA300FPR3757.db, org.MeSH.Sau.USA300TCH1516.db, org.MeSH.Sau.VC40.db, org.MeSH.Sce.S288c.db, org.MeSH.Sco.A32.db, org.MeSH.Sil.db, org.MeSH.Spo.972h.db, org.MeSH.Spu.db, org.MeSH.Ssc.db, org.MeSH.Syn.db, org.MeSH.Tbr.9274.db, org.MeSH.Tgo.ME49.db, org.MeSH.Tgu.db, org.MeSH.Vvi.db, org.MeSH.Xla.db, org.MeSH.Xtr.db, org.MeSH.Zma.db
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source MeSHDbi_1.2.0.tar.gz
Windows Binary MeSHDbi_1.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) MeSHDbi_1.2.0.tgz
Mac OS X 10.9 (Mavericks) MeSHDbi_1.2.0.tgz
Browse/checkout source (username/password: readonly)
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