To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Heatplus")

In most cases, you don't need to download the package archive at all.

Heatplus

Heatmaps with row and/or column covariates and colored clusters

Bioconductor version: Release (2.14)

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

Author: Alexander Ploner <Alexander.Ploner at ki.se>

Maintainer: Alexander Ploner <Alexander.Ploner at ki.se>

Citation (from within R, enter citation("Heatplus")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Heatplus")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Heatplus")

 

PDF R Script Annotated and regular heatmaps
PDF R Script Commented package source
PDF R Script Old functions (deprecated)
PDF   Reference Manual
Text   NEWS

Details

biocViews Microarray, Software, Visualization
Version 2.10.0
In Bioconductor since BioC 1.8 (R-2.3)
License GPL (>= 2)
Depends
Imports graphics, grDevices, stats
Suggests Biobase, hgu95av2.db, limma
System Requirements
URL
Depends On Me GeneAnswers, phenoTest, tRanslatome
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Heatplus_2.10.0.tar.gz
Windows Binary Heatplus_2.10.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) Heatplus_2.10.0.tgz
Mac OS X 10.9 (Mavericks) Heatplus_2.10.0.tgz
Browse/checkout source (username/password: readonly)
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