Tools for HELP data analysis

Bioconductor version: Release (2.14)

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications

Author: Reid F. Thompson <rthompso at>, John M. Greally <jgreally at>, with contributions from Mark Reimers <mreimers at>

Maintainer: Reid F. Thompson <rthompso at>

To install this package, start R and enter:


Citation (from within R, enter citation("HELP")):


PDF R Script 1. Primer
PDF   Reference Manual


biocViews CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version 1.22.0
In Bioconductor since BioC 2.3 (R-2.8)
License GPL (>= 2)
Depends R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods
System Requirements
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source HELP_1.22.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) HELP_1.22.0.tgz
Mac OS X 10.9 (Mavericks) HELP_1.22.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center