To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("HELP")

In most cases, you don't need to download the package archive at all.

HELP

 

Tools for HELP data analysis

Bioconductor version: Release (3.1)

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications

Author: Reid F. Thompson <rthompso at aecom.yu.edu>, John M. Greally <jgreally at aecom.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>

Maintainer: Reid F. Thompson <rthompso at aecom.yu.edu>

Citation (from within R, enter citation("HELP")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("HELP")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HELP")

 

PDF R Script 1. Primer
PDF   Reference Manual

Details

biocViews CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version 1.26.0
In Bioconductor since BioC 2.3 (R-2.8) (7 years)
License GPL (>= 2)
Depends R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source HELP_1.26.0.tar.gz
Windows Binary HELP_1.26.0.zip
Mac OS X 10.6 (Snow Leopard) HELP_1.26.0.tgz
Mac OS X 10.9 (Mavericks) HELP_1.26.0.tgz
Subversion source (username/password: readonly)
GitHub source https://github.com/Bioconductor-mirror/HELP/tree/release-3.1
Package Short Url http://bioconductor.org/packages/HELP/
Package Downloads Report Download Stats

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