To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GraphAlignment")

In most cases, you don't need to download the package archive at all.

GraphAlignment

GraphAlignment

Bioconductor version: Release (3.0)

Graph alignment is an extension package for the R programming environment which provides functions for finding an alignment between two networks based on link and node similarity scores. (J. Berg and M. Laessig, "Cross-species analysis of biological networks by Bayesian alignment", PNAS 103 (29), 10967-10972 (2006))

Author: Joern P. Meier <mail at ionflux.org>, Michal Kolar, Ville Mustonen, Michael Laessig, and Johannes Berg.

Maintainer: Joern P. Meier <mail at ionflux.org>

Citation (from within R, enter citation("GraphAlignment")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GraphAlignment")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GraphAlignment")

 

PDF R Script GraphAlignment
PDF   Reference Manual
Text   LICENSE

Details

biocViews GraphAndNetwork, Network, Software
Version 1.30.0
In Bioconductor since BioC 2.2 (R-2.7)
License file LICENSE
Depends
Imports
Suggests
System Requirements
URL http://www.thp.uni-koeln.de/~berg/GraphAlignment/
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source GraphAlignment_1.30.0.tar.gz
Windows Binary GraphAlignment_1.30.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) GraphAlignment_1.30.0.tgz
Mac OS X 10.9 (Mavericks) GraphAlignment_1.30.0.tgz
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