BCRANK
Predicting binding site consensus from ranked DNA sequences
Bioconductor version: 3.23 · Package version: 1.74.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Functions and classes for de novo prediction of transcription factor binding consensus by heuristic search
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BCRANK")Details
| Maintainer | Adam Ameur <Adam.Ameur@genpat.uu.se> |
| Author | Adam Ameur <Adam.Ameur@genpat.uu.se> |
| License | GPL-2 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | GeneRegulation, MotifDiscovery, Software |
| Package Short Url | https://bioconductor.org/packages/BCRANK/ |
Citation
From within R, enter citation("BCRANK"):
Adam Ameur. BCRANK: Predicting binding site consensus from ranked DNA sequences. doi:10.18129/B9.bioc.BCRANK, R package version 1.74.0, https://bioconductor.org/packages/BCRANK.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | BCRANK_1.74.0.tar.gz |
| Windows binary (x86_64) | BCRANK_1.74.0.zip |
| macOS binary (arm64) | BCRANK_1.74.0.tgz |
| macOS binary (x86_64) | BCRANK_1.74.0.tgz |